BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H11SP1|AL426611
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig741 1588 0.0
>3x_Contig741
Length = 3021
Score = 1588 bits (801), Expect = 0.0
Identities = 853/863 (98%), Gaps = 8/863 (0%)
Strand = Plus / Minus
Query: 1 gatcaagactgttaatcatgtcaaaacagatctataagatattttaatatcgatatgttt 60
||||||||||||||||||||||||||||| |||||||| ||||||||||||| | ||
Sbjct: 1613 gatcaagactgttaatcatgtcaaaacag-tctataag-tattttaatatcg---ttgtt 1559
Query: 61 attcgatgtcatgtagtgatcaagccaccattgttaacaatggtttaaatagtgtaaaag 120
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1558 attcgatgtcatgtagtgatcaag-caccattgttaacaatggtttaaat-gtgtaaaag 1501
Query: 121 tttgtcatagtagtacccagtgcaatggcttttatataagcaccgcgatcatttgaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 tttgtcatagtagtacccagtgcaatggcttttatataagcaccgcgatcatttgaatta 1441
Query: 181 tctaaaaacgtgttcacgacacttaagaaaaataatggtggctcagtttcctctaaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 tctaaaaacgtgttcacgacacttaagaaaaataatggtggctcagtttcctctaaatgc 1381
Query: 241 ctatcatctctaattgatccaatcttaccacttcgcagtccattttcttgttcttcttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 ctatcatctctaattgatccaatcttaccacttcgcagtccattttcttgttcttcttca 1321
Query: 301 aagtcttcctcttcaattatcagtgaggaatccaagtcagtacctttagtcttatttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 aagtcttcctcttcaattatcagtgaggaatccaagtcagtacctttagtcttatttttg 1261
Query: 361 gatacaggaaacaactggtaaacgttttgattcttgtataagacaaaaacagtgaaatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 gatacaggaaacaactggtaaacgttttgattcttgtataagacaaaaacagtgaaatct 1201
Query: 421 ggttta-cctggatggttctccacactattcggtatcatcaaactggccaaatgagaaca 479
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 ggtttaccctggatggttctccacactattcggtatcatcaaactggccaaatgagaaca 1141
Query: 480 agtggaatcactcccaatagttttaaaaccagggattgtctttggatattgatgctttat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 agtggaatcactcccaatagttttaaaaccagggattgtctttggatattgatgctttat 1081
Query: 540 tatcggcccagatttgttatcaaattctgccgctattataaattgaacattggggttaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 tatcggcccagatttgttatcaaattctgccgctattataaattgaacattggggttaga 1021
Query: 600 gtgtgtgtgttcattttgagattgtcgtaggtgaaagttcaatcctgtttttaccttgga 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gtgtgtgtgttcattttgagattgtcgtaggtgaaagttcaatcctgtttttaccttgga 961
Query: 660 agagtgtttcataactggtgaacgcgcggtctttcctctttaattacagagtcagtccgt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 agagtgtttcataactggtgaacgcgcggtctttcctctttaattacagagtcagtccgt 901
Query: 720 ttaccacctgaccgtcgttcggagatttaacttgccagtgagacgtctgtatcatttcgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ttaccacctgaccgtcgttcggagatttaacttgccagtgagacgtctgtatcatttcgc 841
Query: 780 tgtaaaatagcacgattttgacccatcatcgtctttctttttgaaccgatcaaataaaat 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 tgtaaaatagcacgattttgacccatcatcgtctttctttttgaaccgatcaaataaaat 781
Query: 840 gaaccaaataatatcgctaacag 862
|||||||||||||||||||||||
Sbjct: 780 gaaccaaataatatcgctaacag 758
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7575
Number of Sequences: 1807
Number of extensions: 7575
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)